Mariniflexile sp. TRM1-10

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Mariniflexile

Description

Mariniflexile sp. TRM1-10 is characterized by having a single replicon, which suggests a streamlined genomic structure potentially advantageous for its adaptability in specific environments. The accession number for this strain is NZ_CP022985.1, indicating its inclusion in genetic databases for further study. As a member of the microbial community, Mariniflexile sp. TRM1-10 may contribute to various ecological processes, particularly in marine ecosystems. The presence of a single replicon might allow for efficient replication and resource utilization, which can be crucial for survival in fluctuating environmental conditions often encountered in marine habitats. Understanding the genomic features of Mariniflexile sp. TRM1-10 can provide insights into its ecological roles, such as its potential interactions with other microorganisms and its contributions to nutrient cycling. The single replicon may also offer advantages in horizontal gene transfer, enabling the organism to adapt to new environmental pressures or acquire beneficial traits. Overall, Mariniflexile sp. TRM1-10 exemplifies how specific genomic traits can influence the ecological dynamics within microbial communities in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMariniflexile
SpeciesMariniflexile rhizosphaerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariniflexile sp. TRM1-10


Gene Summary

Adenine Count

1591326 bp

Thymine Count

1587800 bp

Guanine Count

839940 bp

Cytosine Count

839259 bp

Genome Length

4858325 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susc/raga family tonb-linked outer membrane proteinCJ739_RS10060Not AvailablePositive2366069 - 2369224114506.0
ragb/susd family nutrient uptake outer membrane proteinCJ739_RS10065Not AvailablePositive2369237 - 237098564832.1
carbohydrate kinase family proteinCJ739_RS10070Not AvailablePositive2371087 - 237197132939.5
gntr family transcriptional regulatorCJ739_RS10075Not AvailablePositive2372358 - 237339839764.6
xylulokinaseCJ739_RS10080Not AvailablePositive2373402 - 237489254651.9
xylose isomeraseCJ739_RS10085Not AvailablePositive2374979 - 237630449278.7
sodium:solute symporterCJ739_RS10090Not AvailablePositive2376402 - 237807561486.4
glycoside hydrolase family 43 proteinCJ739_RS10095Not AvailableNegative2378140 - 237986465124.0
laci family dna-binding transcriptional regulatorCJ739_RS10100Not AvailablePositive2379950 - 238097838029.9
sialate o-acetylesteraseCJ739_RS10105Not AvailableNegative2380980 - 238291773142.7

Displaying genes 2001 – 2010 of 3989 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.