Actinopolyspora erythraea strain YIM 90600

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinopolysporales

Family

Actinopolysporaceae

Genus

Actinopolyspora

Description

Actinopolyspora erythraea strain YIM 90600 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, which is a notable feature in its genetic organization. The strain is cataloged under the accession number NZ_CP022752.1, indicating its genetic sequence is available for further study. This strain belongs to the genus Actinopolyspora, which is known for its role in the production of bioactive compounds. As a Gram-positive organism, A. erythraea may possess thick peptidoglycan layers that can influence its environmental adaptations and interactions with other microorganisms. The unique traits of A. erythraea strain YIM 90600 suggest potential applications in biotechnology and medicine, particularly in the discovery and production of novel antibiotics or other bioactive metabolites. The presence of a single replicon may also provide insights into its genetic stability and evolutionary adaptations. Understanding these characteristics can aid in exploring the ecological role of this bacterium, particularly in soil and natural environments where such actinobacteria are typically found. In conclusion, the specific traits of Actinopolyspora erythraea strain YIM 90600 highlight its significant potential for further research and application in microbial biotechnology, supporting the importance of Gram-positive actinobacteria in ecological and pharmaceutical contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinopolysporales
FamilyActinopolysporaceae
GenusActinopolyspora
SpeciesActinopolyspora erythraea
Strainstrain YIM 90600

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinopolyspora erythraea strain YIM 90600 chromosome, complete

Gene Summary

Adenine Count

821279 bp

Thymine Count

815856 bp

Guanine Count

1797162 bp

Cytosine Count

1809633 bp

Genome Length

5243930 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine deaminaseCDG81_RS19010Not AvailableNegative4354233 - 435462513561.4
succinate dehydrogenase, cytochrome b556 subunitCDG81_RS19015Not AvailablePositive4355075 - 435550916111.0
succinate dehydrogenase hydrophobic membrane anchor subunitCDG81_RS19020Not AvailablePositive4355518 - 435593715927.7
succinate dehydrogenase flavoprotein subunitCDG81_RS19025Not AvailablePositive4355974 - 435776465555.7
succinate dehydrogenase iron-sulfur subunitCDG81_RS19030Not AvailablePositive4357764 - 435855529666.4
sco4848 family membrane proteinCDG81_RS19035Not AvailableNegative4358955 - 43591858577.6
d-alanyl-d-alanine carboxypeptidase family proteinCDG81_RS19040Not AvailablePositive4359276 - 436055344397.1
yhjd/yihy/brkb family envelope integrity proteinCDG81_RS19045Not AvailableNegative4360586 - 436162336967.5
tryptophan--trna ligaseCDG81_RS19050Not AvailableNegative4361683 - 436272638299.1
hypothetical proteinCDG81_RS19055Not AvailableNegative4362835 - 43630808621.81

Displaying genes 3881 – 3890 of 4708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.