Ochrobactrum quorumnocens strain A44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum quorumnocens strain A44 is characterized by possessing two replicons, which are essential for its genomic stability and function. The strain is associated with two specific accessions: NZ_CP022602.1 and NZ_CP022604.1. These accessions provide critical genetic information that can be utilized for further study and characterization of the strain. Ochrobactrum quorumnocens is part of the broader Ochrobactrum genus, which is known for its environmental versatility and ability to thrive in diverse ecological niches. This strain may contribute to various biological processes and ecological interactions, particularly in environments where it is found. The presence of two replicons suggests a potential for genetic diversity and adaptability, which could enhance its survival in fluctuating environmental conditions. In a broader biological context, the adaptability and genetic features of Ochrobactrum quorumnocens strain A44 could play a significant role in microbial community dynamics, particularly in environments impacted by human activities or environmental changes. Understanding the genomic characteristics of this strain through its accessions can offer insights into its potential functions and interactions within microbial ecosystems. This knowledge is valuable for ecological studies and may inform biotechnological applications, considering the ecological roles that members of the Ochrobactrum genus may fulfill.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum quorumnocens
Strainstrain A44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum quorumnocens strain A44 chromosome 1, complete

Gene Summary

Adenine Count

601610 bp

Thymine Count

598260 bp

Guanine Count

688534 bp

Cytosine Count

696989 bp

Genome Length

2585393 bp

Protein-coding Genes

2376 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenaseCES85_RS10580Not AvailablePositive242739 - 24503382554.6
cu(i)-responsive transcriptional regulatorCES85_RS10585Not AvailableNegative245171 - 24562016833.3
glu/leu/phe/val family dehydrogenaseCES85_RS10590Not AvailableNegative245810 - 24707546092.2
hd domain-containing proteinCES85_RS10595Not AvailableNegative247314 - 24796724788.5
sarcosine oxidase subunit beta family proteinCES85_RS10600Not AvailablePositive248211 - 24946445264.2
sarcosine oxidase subunit deltaCES85_RS10605Not AvailablePositive249484 - 24978911631.5
sarcosine oxidase subunit alphaCES85_RS10610Not AvailablePositive249789 - 252788108647.0
sarcosine oxidase subunit gammaCES85_RS10615Not AvailablePositive252799 - 25335320512.6
caib/baif coa transferase family proteinCES85_RS10620Not AvailablePositive253708 - 25486542133.8
extracellular solute-binding proteinCES85_RS10625Not AvailablePositive254862 - 25598641141.6

Displaying genes 351 – 360 of 2533 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.