Porphyrobacter sp. HT-58-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. HT-58-2 is characterized by having a single replicon, which is significant for its genomic organization. The genome is represented in the GenBank database under the accession number NZ_CP022600.1. This classification indicates that Porphyrobacter sp. HT-58-2 is part of the Porphyrobacter genus, which is typically associated with various ecological niches, often including aquatic environments. The single replicon structure may suggest a streamlined genomic architecture, potentially facilitating efficient replication and maintenance of genetic material. This trait can be advantageous in specific environments where rapid adaptation or reproduction is necessary. In terms of ecological insight, members of the Porphyrobacter genus are known to play roles in biogeochemical processes, particularly in phototrophic pathways. Given that Porphyrobacter sp. HT-58-2 is part of this genus, it may contribute to nutrient cycling in its habitat. This could involve processes such as organic matter decomposition or interactions with other microbial communities in its ecosystem. Overall, the genomic characteristics of Porphyrobacter sp. HT-58-2, particularly its single replicon, highlight its potential adaptability and ecological roles, which may be significant in understanding the microbial dynamics in its natural environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. HT-58-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. HT-58-2 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseCHX26_RS01295Not AvailablePositive269973 - 27087531678.2
kynureninaseCHX26_RS01300Not AvailableNegative270872 - 27209543503.1
tryptophan 2,3-dioxygenaseCHX26_RS01305Not AvailableNegative272092 - 27288329923.8
duf4112 domain-containing proteinCHX26_RS01310Not AvailableNegative272921 - 27334615213.9
abc transporter substrate-binding proteinCHX26_RS01315Not AvailableNegative273352 - 27466847711.3
pilz domain-containing proteinCHX26_RS01320Not AvailableNegative274882 - 27525913973.7
rna polymerase-binding protein dksaCHX26_RS01325Not AvailableNegative275443 - 27590117409.4
sel1 repeat family proteinCHX26_RS01330Not AvailablePositive276176 - 27649611300.2
gnat family n-acetyltransferaseCHX26_RS01335Not AvailableNegative276493 - 27764142036.5
glycerophosphodiester phosphodiesterase family proteinCHX26_RS01340Not AvailableNegative277638 - 27836626681.4

Displaying genes 281 – 290 of 3151 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.