Porphyrobacter sp. HT-58-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. HT-58-2 is characterized by having a single replicon, which is significant for its genomic organization. The genome is represented in the GenBank database under the accession number NZ_CP022600.1. This classification indicates that Porphyrobacter sp. HT-58-2 is part of the Porphyrobacter genus, which is typically associated with various ecological niches, often including aquatic environments. The single replicon structure may suggest a streamlined genomic architecture, potentially facilitating efficient replication and maintenance of genetic material. This trait can be advantageous in specific environments where rapid adaptation or reproduction is necessary. In terms of ecological insight, members of the Porphyrobacter genus are known to play roles in biogeochemical processes, particularly in phototrophic pathways. Given that Porphyrobacter sp. HT-58-2 is part of this genus, it may contribute to nutrient cycling in its habitat. This could involve processes such as organic matter decomposition or interactions with other microbial communities in its ecosystem. Overall, the genomic characteristics of Porphyrobacter sp. HT-58-2, particularly its single replicon, highlight its potential adaptability and ecological roles, which may be significant in understanding the microbial dynamics in its natural environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. HT-58-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. HT-58-2 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein travCHX26_RS09255Not AvailableNegative1957626 - 195835125577.9
dsbc family proteinCHX26_RS09260Not AvailableNegative1958357 - 195924731266.6
trbi/virb10 family proteinCHX26_RS09265Not AvailableNegative1959244 - 196057845490.9
type-f conjugative transfer system secretin trakCHX26_RS09270Not AvailableNegative1960575 - 196133626627.8
type iv conjugative transfer system protein traeCHX26_RS09275Not AvailableNegative1961336 - 196190820858.2
type iv conjugative transfer system protein tralCHX26_RS09280Not AvailableNegative1961921 - 196220810527.9
trbc/virb2 family proteinCHX26_RS09285Not AvailableNegative1962238 - 196258211260.9
helix-turn-helix domain-containing proteinCHX26_RS09290Not AvailablePositive1962931 - 196338316553.4
helix-turn-helix transcriptional regulatorCHX26_RS09295Not AvailablePositive1963503 - 19637007413.02
duf11 domain-containing proteinCHX26_RS09300Not AvailableNegative1963734 - 196538056365.7

Displaying genes 1881 – 1890 of 3151 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.