Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21 plasmid unnamed, complete sequence.
Gene Summary
Adenine Count
43962 bp
Thymine Count
46506 bp
Guanine Count
53719 bp
Cytosine Count
52392 bp
Genome Length
196579 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ardc family protein | CHN51_RS00740 | Not Available | Negative | 157338 - 158264 | 34280.4 |
| atp-binding protein | CHN51_RS00745 | Not Available | Positive | 158395 - 159561 | 43603.5 |
| parb/repb/spo0j family partition protein | CHN51_RS00750 | Not Available | Negative | 159651 - 161630 | 72773.3 |
| strawberry notch-like ntp hydrolase domain-containing protein | CHN51_RS00755 | Not Available | Negative | 161777 - 165835 | 149444.0 |
| toprim domain-containing protein | CHN51_RS00760 | Not Available | Negative | 166123 - 167031 | 33040.7 |
| lytic transglycosylase domain-containing protein | CHN51_RS00765 | Not Available | Positive | 167168 - 167833 | 24208.0 |
| duf5818 domain-containing protein | CHN51_RS19450 | Not Available | Positive | 167852 - 168061 | 7820.36 |
| m24 family metallopeptidase | CHN51_RS00825 | Not Available | Negative | 182668 - 183828 | 42062.1 |
| formate dehydrogenase accessory sulfurtransferase fdhd | CHN51_RS00830 | Not Available | Negative | 183883 - 184659 | 27611.8 |
| formate dehydrogenase subunit delta | CHN51_RS00835 | Not Available | Negative | 184660 - 184917 | 8922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
