Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21 plasmid unnamed, complete sequence.
Gene Summary
Adenine Count
43962 bp
Thymine Count
46506 bp
Guanine Count
53719 bp
Cytosine Count
52392 bp
Genome Length
196579 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copc | CHN51_RS00640 | Not Available | Negative | 130627 - 130992 | 13150.0 |
| apc family permease | CHN51_RS00645 | Not Available | Negative | 131126 - 132433 | 45473.9 |
| pyridoxal-phosphate dependent enzyme | CHN51_RS00650 | Not Available | Negative | 132430 - 133725 | 45609.8 |
| cystathionine beta-lyase | CHN51_RS00655 | Not Available | Negative | 133650 - 134822 | 42541.6 |
| lysr substrate-binding domain-containing protein | CHN51_RS00660 | Not Available | Positive | 135070 - 136041 | 35380.7 |
| tonb-dependent receptor plug domain-containing protein | CHN51_RS00665 | Not Available | Negative | 136269 - 138770 | 89223.9 |
| eco57i restriction-modification methylase domain-containing protein | CHN51_RS00670 | Not Available | Positive | 139400 - 143587 | 158423.0 |
| atp-binding protein | CHN51_RS00675 | Not Available | Negative | 143660 - 145492 | 67483.2 |
| sir2 family protein | CHN51_RS00680 | Not Available | Negative | 145489 - 146697 | 45278.2 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | CHN51_RS00685 | Not Available | Negative | 146813 - 149227 | 89467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
