Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21 plasmid unnamed, complete sequence.
Gene Summary
Adenine Count
43962 bp
Thymine Count
46506 bp
Guanine Count
53719 bp
Cytosine Count
52392 bp
Genome Length
196579 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | CHN51_RS17875 | Not Available | Negative | 3728452 - 3729576 | 41116.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CHN51_RS17880 | Not Available | Negative | 3729573 - 3730733 | 40969.1 |
| phosphatidate cytidylyltransferase | CHN51_RS17885 | Not Available | Negative | 3730730 - 3731533 | 28082.3 |
| isoprenyl transferase | CHN51_RS17890 | Not Available | Negative | 3731536 - 3732246 | 26478.7 |
| ribosome recycling factor | CHN51_RS17895 | Not Available | Negative | 3732300 - 3732857 | 20810.0 |
| ump kinase | CHN51_RS17900 | Not Available | Negative | 3732881 - 3733603 | 25531.9 |
| translation elongation factor ts | CHN51_RS17905 | Not Available | Negative | 3733723 - 3734649 | 32185.5 |
| 30s ribosomal protein s2 | CHN51_RS17910 | Not Available | Negative | 3734758 - 3735621 | 30314.1 |
| pas domain s-box protein | CHN51_RS17915 | Not Available | Negative | 3735863 - 3738133 | 82462.7 |
| hypothetical protein | CHN51_RS17920 | Not Available | Positive | 3738316 - 3738558 | 8856.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
