Shewanella bicestrii strain JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii strain JAB-1 is a notable bacterium characterized by the presence of flagella, which are important for its motility. This feature allows the organism to navigate its environment, potentially aiding in its ecological interactions and survival strategies. The strain is genomic and consists of three replicons, which are segments of its genetic material that can replicate independently. The presence of multiple replicons may suggest a complex genomic organization that could contribute to its adaptability and metabolic versatility in varying environments. Genomic data for Shewanella bicestrii strain JAB-1 is available under three accessions: NZ_CP022359.1, NZ_CP022360.1, and NZ_CP022358.1. These accessions provide a foundation for further research into the strain’s genetic makeup and functional capabilities. In summary, the combination of flagella for motility and the presence of three replicons may enhance the ecological fitness of Shewanella bicestrii strain JAB-1, allowing it to thrive in diverse environments. Such traits highlight the organism's potential significance in various biological processes, including bioremediation and nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
Strainstrain JAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1223 domain-containing proteinCF168_RS01615Not AvailablePositive336620 - 33743531168.1
branched-chain amino acid aminotransferaseCF168_RS01620Not AvailablePositive337592 - 33868340075.9
eal domain-containing proteinCF168_RS01625Not AvailableNegative338743 - 343260169116.0
2-methylaconitate cis-trans isomerase prpfCF168_RS01630Not AvailableNegative343540 - 34473341517.8
fe/s-dependent 2-methylisocitrate dehydratase acndCF168_RS01635Not AvailableNegative344820 - 34742394738.0
2-methylcitrate synthaseCF168_RS01640Not AvailableNegative347562 - 34868941463.7
methylisocitrate lyaseCF168_RS01645Not AvailableNegative348923 - 34980131855.1
gntr family transcriptional regulatorCF168_RS01650Not AvailableNegative349868 - 35065629066.8
duf523 domain-containing proteinCF168_RS01655Not AvailablePositive350989 - 35146216783.1
acyltransferaseCF168_RS01660Not AvailableNegative351495 - 35243635615.8

Displaying genes 561 – 570 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.