Shewanella bicestrii strain JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii strain JAB-1 is a notable bacterium characterized by the presence of flagella, which are important for its motility. This feature allows the organism to navigate its environment, potentially aiding in its ecological interactions and survival strategies. The strain is genomic and consists of three replicons, which are segments of its genetic material that can replicate independently. The presence of multiple replicons may suggest a complex genomic organization that could contribute to its adaptability and metabolic versatility in varying environments. Genomic data for Shewanella bicestrii strain JAB-1 is available under three accessions: NZ_CP022359.1, NZ_CP022360.1, and NZ_CP022358.1. These accessions provide a foundation for further research into the strain’s genetic makeup and functional capabilities. In summary, the combination of flagella for motility and the presence of three replicons may enhance the ecological fitness of Shewanella bicestrii strain JAB-1, allowing it to thrive in diverse environments. Such traits highlight the organism's potential significance in various biological processes, including bioremediation and nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
Strainstrain JAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseCF168_RS18890Not AvailableNegative4315536 - 431636330184.3
diaminopimelate decarboxylaseCF168_RS18895Not AvailableNegative4316434 - 431767845236.0
lps translocon maturation chaperone lptmCF168_RS18900Not AvailableNegative4317721 - 43179156958.5
iron donor protein cyayCF168_RS18905Not AvailablePositive4317983 - 431831212171.2
class i adenylate cyclaseCF168_RS18910Not AvailableNegative4318354 - 432076892582.6
hydroxymethylbilane synthaseCF168_RS18915Not AvailablePositive4320971 - 432190333472.7
uroporphyrinogen-iii synthaseCF168_RS18920Not AvailablePositive4321908 - 432264826613.8
uroporphyrinogen-iii c-methyltransferaseCF168_RS18925Not AvailablePositive4322709 - 432395045830.3
heme biosynthesis hemy n-terminal domain-containing proteinCF168_RS18930Not AvailablePositive4323947 - 432511343936.7
ig-like domain-containing proteinCF168_RS18935Not AvailablePositive4325514 - 4341449540643.0

Displaying genes 3991 – 4000 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.