Shewanella bicestrii strain JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii strain JAB-1 is a notable bacterium characterized by the presence of flagella, which are important for its motility. This feature allows the organism to navigate its environment, potentially aiding in its ecological interactions and survival strategies. The strain is genomic and consists of three replicons, which are segments of its genetic material that can replicate independently. The presence of multiple replicons may suggest a complex genomic organization that could contribute to its adaptability and metabolic versatility in varying environments. Genomic data for Shewanella bicestrii strain JAB-1 is available under three accessions: NZ_CP022359.1, NZ_CP022360.1, and NZ_CP022358.1. These accessions provide a foundation for further research into the strain’s genetic makeup and functional capabilities. In summary, the combination of flagella for motility and the presence of three replicons may enhance the ecological fitness of Shewanella bicestrii strain JAB-1, allowing it to thrive in diverse environments. Such traits highlight the organism's potential significance in various biological processes, including bioremediation and nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
Strainstrain JAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nupc/nupg family nucleoside cnt transporterCF168_RS15540Not AvailableNegative3558461 - 355972043511.5
tatd family hydrolaseCF168_RS15545Not AvailableNegative3559897 - 356066128415.5
hypothetical proteinCF168_RS22685Not AvailableNegative3560672 - 35608547074.63
peptide chain release factor 3CF168_RS15555Not AvailableNegative3560924 - 356250459386.3
lipoprotein nlpiCF168_RS15560Not AvailableNegative3562604 - 356350634092.6
polyribonucleotide nucleotidyltransferaseCF168_RS15565Not AvailableNegative3563698 - 356579775383.4
putative bifunctional diguanylate cyclase/phosphodiesteraseCF168_RS15570Not AvailablePositive3565990 - 356804476507.0
30s ribosomal protein s15CF168_RS15575Not AvailableNegative3568131 - 356840010216.4
trna pseudouridine(55) synthase trubCF168_RS15580Not AvailableNegative3568542 - 356948034520.7
30s ribosome-binding factor rbfaCF168_RS15585Not AvailableNegative3569480 - 356992016638.9

Displaying genes 3331 – 3340 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.