Shewanella bicestrii strain JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii strain JAB-1 is a notable bacterium characterized by the presence of flagella, which are important for its motility. This feature allows the organism to navigate its environment, potentially aiding in its ecological interactions and survival strategies. The strain is genomic and consists of three replicons, which are segments of its genetic material that can replicate independently. The presence of multiple replicons may suggest a complex genomic organization that could contribute to its adaptability and metabolic versatility in varying environments. Genomic data for Shewanella bicestrii strain JAB-1 is available under three accessions: NZ_CP022359.1, NZ_CP022360.1, and NZ_CP022358.1. These accessions provide a foundation for further research into the strain’s genetic makeup and functional capabilities. In summary, the combination of flagella for motility and the presence of three replicons may enhance the ecological fitness of Shewanella bicestrii strain JAB-1, allowing it to thrive in diverse environments. Such traits highlight the organism's potential significance in various biological processes, including bioremediation and nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
Strainstrain JAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trab/virb10 family proteinCF168_RS21010Not AvailablePositive2711 - 402447411.2
type iv conjugative transfer system lipoprotein travCF168_RS21015Not AvailablePositive4021 - 459920783.6
traa family conjugative transfer proteinCF168_RS21020Not AvailablePositive4603 - 499513437.6
ig-like domain-containing proteinCF168_RS21025Not AvailablePositive5196 - 10727200730.0
dsbc family proteinCF168_RS21030Not AvailablePositive10876 - 1158325833.4
type iv secretion system protein tracCF168_RS21035Not AvailablePositive11580 - 1402792596.1
hypothetical proteinCF168_RS21040Not AvailablePositive14042 - 1435910998.2
s26 family signal peptidaseCF168_RS21045Not AvailablePositive14356 - 1488620169.4
trbc family f-type conjugative pilus assembly proteinCF168_RS21050Not AvailablePositive14849 - 1611446531.0
eal domain-containing proteinCF168_RS21055Not AvailablePositive16111 - 1678225581.6

Displaying genes 21 – 30 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.