Shewanella bicestrii strain JAB-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella bicestrii strain JAB-1 is a notable bacterium characterized by the presence of flagella, which are important for its motility. This feature allows the organism to navigate its environment, potentially aiding in its ecological interactions and survival strategies. The strain is genomic and consists of three replicons, which are segments of its genetic material that can replicate independently. The presence of multiple replicons may suggest a complex genomic organization that could contribute to its adaptability and metabolic versatility in varying environments. Genomic data for Shewanella bicestrii strain JAB-1 is available under three accessions: NZ_CP022359.1, NZ_CP022360.1, and NZ_CP022358.1. These accessions provide a foundation for further research into the strain’s genetic makeup and functional capabilities. In summary, the combination of flagella for motility and the presence of three replicons may enhance the ecological fitness of Shewanella bicestrii strain JAB-1, allowing it to thrive in diverse environments. Such traits highlight the organism's potential significance in various biological processes, including bioremediation and nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella bicestrii
Strainstrain JAB-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete

Gene Summary

Adenine Count

3287 bp

Thymine Count

2915 bp

Guanine Count

2035 bp

Cytosine Count

2242 bp

Genome Length

10479 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mosc domain-containing proteinCF168_RS00105Not AvailableNegative23889 - 2432615818.1
sulfurtransferase tusaCF168_RS00110Not AvailableNegative24362 - 246079130.12
diguanylate cyclase domain-containing proteinCF168_RS00115Not AvailableNegative24766 - 2595945560.1
acetyl-coa c-acyltransferase fadaCF168_RS00120Not AvailableNegative26193 - 2735640670.6
fatty acid oxidation complex subunit alpha fadbCF168_RS00125Not AvailableNegative27379 - 2952976649.9
xaa-pro dipeptidaseCF168_RS00130Not AvailablePositive29973 - 3129249970.5
yigz family proteinCF168_RS00135Not AvailablePositive31308 - 3192222364.8
trkh family potassium uptake proteinCF168_RS00140Not AvailablePositive32000 - 3345753280.0
menaquinone-dependent protoporphyrinogen ix dehydrogenaseCF168_RS00145Not AvailablePositive33459 - 3398319959.3
arsr/smtb family transcription factorCF168_RS00150Not AvailableNegative34038 - 3434611432.9

Displaying genes 261 – 270 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.