Paraphotobacterium marinum strain NSCS20N07D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Paraphotobacterium

Description

Paraphotobacterium marinum strain NSCS20N07D is characterized by having three distinct replicons, which indicates a complex genomic structure that may contribute to its adaptability and metabolic versatility. The strain is cataloged under three accession numbers: NZ_CP022355.1, NZ_CP022357.1, and NZ_CP022356.1, which provide a means for researchers to access its genomic data for further study. As a member of the Paraphotobacterium genus, this strain is likely to possess traits that enable it to thrive in marine environments. While specific ecological roles or behaviors of Paraphotobacterium marinum strain NSCS20N07D are not detailed, the presence of multiple replicons may suggest an evolutionary advantage, allowing for diverse genetic adaptations necessary for survival in fluctuating marine conditions. In summary, the genomic complexity of Paraphotobacterium marinum strain NSCS20N07D, as indicated by its three replicons and associated accessions, suggests that it may play a significant role in marine ecosystems. Its potential adaptability could have implications for nutrient cycling and interactions with other marine microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusParaphotobacterium
SpeciesParaphotobacterium marinum
Strainstrain NSCS20N07D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete

Gene Summary

Adenine Count

1894 bp

Thymine Count

1694 bp

Guanine Count

995 bp

Cytosine Count

956 bp

Genome Length

5539 bp

Protein-coding Genes

3 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome biogenesis gtpase ylqfCF386_RS12200Not AvailableNegative1077276 - 107821435718.8
hypothetical proteinCF386_RS12205Not AvailableNegative1078353 - 107879617387.2
mfs transporterCF386_RS12210Not AvailablePositive1079091 - 108026944490.5
gamma-glutamylcyclotransferase family proteinCF386_RS12215Not AvailablePositive1080350 - 108091921812.3
duf2750 domain-containing proteinCF386_RS12220Not AvailablePositive1080936 - 108128913772.2
smp-30/gluconolactonase/lre family proteinCF386_RS12225Not AvailablePositive1081317 - 108221633554.4
dihydrolipoyl dehydrogenaseCF386_RS12230Not AvailablePositive1082505 - 108312123500.2
lon protease family proteinCF386_RS12235Not AvailablePositive1083234 - 108560990311.0
lysr family transcriptional regulatorCF386_RS12240Not AvailableNegative1085615 - 108650834023.3
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseCF386_RS12245Not AvailablePositive1086700 - 108782439978.4

Displaying genes 981 – 990 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.