Paraphotobacterium marinum strain NSCS20N07D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Paraphotobacterium

Description

Paraphotobacterium marinum strain NSCS20N07D is characterized by having three distinct replicons, which indicates a complex genomic structure that may contribute to its adaptability and metabolic versatility. The strain is cataloged under three accession numbers: NZ_CP022355.1, NZ_CP022357.1, and NZ_CP022356.1, which provide a means for researchers to access its genomic data for further study. As a member of the Paraphotobacterium genus, this strain is likely to possess traits that enable it to thrive in marine environments. While specific ecological roles or behaviors of Paraphotobacterium marinum strain NSCS20N07D are not detailed, the presence of multiple replicons may suggest an evolutionary advantage, allowing for diverse genetic adaptations necessary for survival in fluctuating marine conditions. In summary, the genomic complexity of Paraphotobacterium marinum strain NSCS20N07D, as indicated by its three replicons and associated accessions, suggests that it may play a significant role in marine ecosystems. Its potential adaptability could have implications for nutrient cycling and interactions with other marine microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusParaphotobacterium
SpeciesParaphotobacterium marinum
Strainstrain NSCS20N07D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete

Gene Summary

Adenine Count

1894 bp

Thymine Count

1694 bp

Guanine Count

995 bp

Cytosine Count

956 bp

Genome Length

5539 bp

Protein-coding Genes

3 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-metNot AvailableNot AvailablePositive755614 - 755690Not Available
Trna-glyNot AvailableNot AvailablePositive755694 - 755769Not Available
Trna-metNot AvailableNot AvailablePositive755788 - 755864Not Available
Trna-glyNot AvailableNot AvailablePositive755868 - 755943Not Available
trna epoxyqueuosine(34) reductase quegCF386_RS04080Not AvailableNegative756178 - 75730243516.5
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCF386_RS04085Not AvailablePositive757409 - 75787918108.8
dna mismatch repair endonuclease mutlCF386_RS04090Not AvailablePositive757869 - 75968969416.6
trna (adenosine(37)-n6)-dimethylallyltransferase miaaCF386_RS04095Not AvailablePositive759686 - 76060635380.3
rna chaperone hfqCF386_RS04100Not AvailablePositive760699 - 7609539532.6
ribosome rescue gtpase hflxCF386_RS04105Not AvailablePositive760971 - 76226048459.4

Displaying genes 1881 – 1890 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.