Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Paraphotobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Paraphotobacterium |
| Species | Paraphotobacterium marinum |
| Strain | strain NSCS20N07D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete
Gene Summary
Adenine Count
1894 bp
Thymine Count
1694 bp
Guanine Count
995 bp
Cytosine Count
956 bp
Genome Length
5539 bp
Protein-coding Genes
3 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | CF386_RS03125 | Not Available | Positive | 571163 - 571678 | 19503.7 |
| methionyl-trna formyltransferase | CF386_RS03130 | Not Available | Positive | 571767 - 572708 | 34970.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CF386_RS03135 | Not Available | Positive | 572718 - 573977 | 47386.4 |
| trk system potassium transporter trka | CF386_RS03140 | Not Available | Positive | 573938 - 575350 | 51863.4 |
| elongation factor p hydroxylase | CF386_RS03145 | Not Available | Positive | 575350 - 576794 | 52731.0 |
| hypothetical protein | CF386_RS03150 | Not Available | Positive | 577098 - 577829 | 27590.8 |
| glycosyltransferase family 4 protein | CF386_RS03155 | Not Available | Negative | 578998 - 580182 | 45025.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | CF386_RS03160 | Not Available | Negative | 580188 - 581315 | 42687.3 |
| nad-dependent epimerase/dehydratase family protein | CF386_RS03165 | Not Available | Negative | 581317 - 582441 | 42969.4 |
| polysaccharide biosynthesis protein | CF386_RS03170 | Not Available | Negative | 582438 - 583463 | 38766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
