Paraphotobacterium marinum strain NSCS20N07D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Paraphotobacterium

Description

Paraphotobacterium marinum strain NSCS20N07D is characterized by having three distinct replicons, which indicates a complex genomic structure that may contribute to its adaptability and metabolic versatility. The strain is cataloged under three accession numbers: NZ_CP022355.1, NZ_CP022357.1, and NZ_CP022356.1, which provide a means for researchers to access its genomic data for further study. As a member of the Paraphotobacterium genus, this strain is likely to possess traits that enable it to thrive in marine environments. While specific ecological roles or behaviors of Paraphotobacterium marinum strain NSCS20N07D are not detailed, the presence of multiple replicons may suggest an evolutionary advantage, allowing for diverse genetic adaptations necessary for survival in fluctuating marine conditions. In summary, the genomic complexity of Paraphotobacterium marinum strain NSCS20N07D, as indicated by its three replicons and associated accessions, suggests that it may play a significant role in marine ecosystems. Its potential adaptability could have implications for nutrient cycling and interactions with other marine microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusParaphotobacterium
SpeciesParaphotobacterium marinum
Strainstrain NSCS20N07D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraphotobacterium marinum strain NSCS20N07D plasmid p1, complete

Gene Summary

Adenine Count

1894 bp

Thymine Count

1694 bp

Guanine Count

995 bp

Cytosine Count

956 bp

Genome Length

5539 bp

Protein-coding Genes

3 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle-docking protein ftsyCF386_RS02925Not AvailableNegative532174 - 53399168175.5
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCF386_RS02930Not AvailablePositive534070 - 53463321568.1
yhgn family naat transporterCF386_RS02935Not AvailableNegative534636 - 53522321622.8
cof-type had-iib family hydrolaseCF386_RS02940Not AvailablePositive535330 - 53614831046.2
nad(p)/fad-dependent oxidoreductaseCF386_RS02945Not AvailableNegative536249 - 53743944094.0
nad(p)h-flavin reductaseCF386_RS02950Not AvailableNegative537442 - 53814626980.2
4-hydroxy-3-polyprenylbenzoate decarboxylaseCF386_RS02955Not AvailableNegative538161 - 53962755077.5
transcription termination factor rhoCF386_RS02960Not AvailableNegative539712 - 54097747138.1
thioredoxin trxaCF386_RS02965Not AvailableNegative541158 - 54148111812.3
atp-dependent rna helicase rhlbCF386_RS02970Not AvailablePositive541583 - 54285448302.1

Displaying genes 1651 – 1660 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.