Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic metabolism and the presence of flagella, which facilitate motility in its environment. This strain thrives optimally at a temperature of 32°C and is classified as mesophilic, indicating it can grow within a moderate temperature range, although specific limits are not provided. Notably, Shewanella marisflavi strain EP1 is non-spore-forming, suggesting that it relies on other survival mechanisms rather than sporulation for resilience in unfavorable conditions. The genomic structure of this strain includes a single replicon, which may influence its genetic stability and replication processes. Ecologically, Shewanella species, including S. marisflavi, are often associated with aquatic environments, where they play significant roles in biogeochemical cycles, particularly in the reduction of metals and organic compounds. The anaerobic nature of strain EP1 indicates that it may participate in anaerobic respiration processes, contributing to nutrient cycling in marine ecosystems. The presence of flagella suggests that it can navigate through sediment or water columns, potentially impacting the distribution of nutrients and organic matter in its habitat. These traits highlight the ecological importance of S. marisflavi strain EP1 in its environment, emphasizing its role in anaerobic processes within aquatic ecosystems. The strain is cataloged under accession NZ_CP022272.1, facilitating further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella marisflavi strain EP1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenaseCFF01_RS16820Not AvailableNegative3820740 - 382216750796.5
dihydrolipoyllysine-residue acetyltransferaseCFF01_RS16825Not AvailableNegative3822321 - 382427966802.2
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeCFF01_RS16830Not AvailableNegative3824291 - 382695799516.2
pyruvate dehydrogenase complex transcriptional repressor pdhrCFF01_RS16835Not AvailableNegative3827028 - 382778028318.1
beta-lactamase regulator ampeCFF01_RS16840Not AvailableNegative3828031 - 382888231660.3
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdCFF01_RS16845Not AvailableNegative3828914 - 382946520584.2
carboxylating nicotinate-nucleotide diphosphorylaseCFF01_RS16850Not AvailablePositive3829743 - 383062131730.1
pgll family o-oligosaccharyltransferaseCFF01_RS16855Not AvailablePositive3830668 - 383234763759.6
trkh family potassium uptake proteinCFF01_RS19225Not AvailablePositive3832773 - 38328904306.52
type iv-a pilus assembly atpase pilbCFF01_RS16865Not AvailablePositive3833184 - 383489063064.9

Displaying genes 3351 – 3360 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.