Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic metabolism and the presence of flagella, which facilitate motility in its environment. This strain thrives optimally at a temperature of 32°C and is classified as mesophilic, indicating it can grow within a moderate temperature range, although specific limits are not provided. Notably, Shewanella marisflavi strain EP1 is non-spore-forming, suggesting that it relies on other survival mechanisms rather than sporulation for resilience in unfavorable conditions. The genomic structure of this strain includes a single replicon, which may influence its genetic stability and replication processes. Ecologically, Shewanella species, including S. marisflavi, are often associated with aquatic environments, where they play significant roles in biogeochemical cycles, particularly in the reduction of metals and organic compounds. The anaerobic nature of strain EP1 indicates that it may participate in anaerobic respiration processes, contributing to nutrient cycling in marine ecosystems. The presence of flagella suggests that it can navigate through sediment or water columns, potentially impacting the distribution of nutrients and organic matter in its habitat. These traits highlight the ecological importance of S. marisflavi strain EP1 in its environment, emphasizing its role in anaerobic processes within aquatic ecosystems. The strain is cataloged under accession NZ_CP022272.1, facilitating further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella marisflavi strain EP1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine-hydrolyzing gmp synthaseCFF01_RS12975Not AvailableNegative2929246 - 293082358237.8
imp dehydrogenaseCFF01_RS12980Not AvailableNegative2930930 - 293239652130.9
exodeoxyribonuclease vii large subunitCFF01_RS12985Not AvailablePositive2932516 - 293384449337.2
hypothetical proteinCFF01_RS12990Not AvailableNegative2933901 - 293443419162.0
ribosome biogenesis gtpase derCFF01_RS12995Not AvailableNegative2934659 - 293612854697.5
outer membrane protein assembly factor bambCFF01_RS13000Not AvailableNegative2936223 - 293741043077.8
tetratricopeptide repeat proteinCFF01_RS13005Not AvailableNegative2937422 - 293804522211.0
histidine--trna ligaseCFF01_RS13010Not AvailableNegative2938060 - 293933147133.4
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseCFF01_RS13015Not AvailableNegative2939484 - 294059940552.9
rodz domain-containing proteinCFF01_RS13020Not AvailableNegative2940620 - 294158234989.7

Displaying genes 2581 – 2590 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.