Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic metabolism and the presence of flagella, which facilitate motility in its environment. This strain thrives optimally at a temperature of 32°C and is classified as mesophilic, indicating it can grow within a moderate temperature range, although specific limits are not provided. Notably, Shewanella marisflavi strain EP1 is non-spore-forming, suggesting that it relies on other survival mechanisms rather than sporulation for resilience in unfavorable conditions. The genomic structure of this strain includes a single replicon, which may influence its genetic stability and replication processes. Ecologically, Shewanella species, including S. marisflavi, are often associated with aquatic environments, where they play significant roles in biogeochemical cycles, particularly in the reduction of metals and organic compounds. The anaerobic nature of strain EP1 indicates that it may participate in anaerobic respiration processes, contributing to nutrient cycling in marine ecosystems. The presence of flagella suggests that it can navigate through sediment or water columns, potentially impacting the distribution of nutrients and organic matter in its habitat. These traits highlight the ecological importance of S. marisflavi strain EP1 in its environment, emphasizing its role in anaerobic processes within aquatic ecosystems. The strain is cataloged under accession NZ_CP022272.1, facilitating further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella marisflavi strain EP1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit betaCFF01_RS09560Not AvailableNegative2180368 - 218065510650.7
30s ribosomal protein s1CFF01_RS09565Not AvailableNegative2180728 - 218239561178.4
(d)cmp kinaseCFF01_RS09570Not AvailableNegative2182495 - 218318724859.9
3-phosphoshikimate 1-carboxyvinyltransferaseCFF01_RS09575Not AvailableNegative2183362 - 218464245677.9
amino acid aminotransferaseCFF01_RS09580Not AvailablePositive2185023 - 218621343481.1
3-phosphoserine/phosphohydroxythreonine transaminaseCFF01_RS09585Not AvailableNegative2186312 - 218740640580.3
dna gyrase subunit aCFF01_RS09590Not AvailableNegative2187542 - 219016996736.9
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigCFF01_RS09595Not AvailablePositive2190484 - 219120026372.8
had family hydrolaseCFF01_RS09600Not AvailablePositive2191251 - 219191323973.8
class 1a ribonucleoside-diphosphate reductase subunit alphaCFF01_RS09605Not AvailablePositive2192392 - 219468085811.1

Displaying genes 1901 – 1910 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.