Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic metabolism and the presence of flagella, which facilitate motility in its environment. This strain thrives optimally at a temperature of 32°C and is classified as mesophilic, indicating it can grow within a moderate temperature range, although specific limits are not provided. Notably, Shewanella marisflavi strain EP1 is non-spore-forming, suggesting that it relies on other survival mechanisms rather than sporulation for resilience in unfavorable conditions. The genomic structure of this strain includes a single replicon, which may influence its genetic stability and replication processes. Ecologically, Shewanella species, including S. marisflavi, are often associated with aquatic environments, where they play significant roles in biogeochemical cycles, particularly in the reduction of metals and organic compounds. The anaerobic nature of strain EP1 indicates that it may participate in anaerobic respiration processes, contributing to nutrient cycling in marine ecosystems. The presence of flagella suggests that it can navigate through sediment or water columns, potentially impacting the distribution of nutrients and organic matter in its habitat. These traits highlight the ecological importance of S. marisflavi strain EP1 in its environment, emphasizing its role in anaerobic processes within aquatic ecosystems. The strain is cataloged under accession NZ_CP022272.1, facilitating further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella marisflavi strain EP1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m3 family metallopeptidaseCFF01_RS08850Not AvailableNegative2035176 - 203685263228.5
alpha-l-glutamate ligase-like proteinCFF01_RS08855Not AvailableNegative2036815 - 203777134925.4
uup1 family membrane proteinCFF01_RS08860Not AvailableNegative2037774 - 203927955566.8
atp-dependent zinc proteaseCFF01_RS08865Not AvailableNegative2039298 - 204003227138.1
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobCFF01_RS08870Not AvailableNegative2040056 - 204104837719.2
carboxy-s-adenosyl-l-methionine synthase cmoaCFF01_RS08875Not AvailableNegative2041045 - 204177627413.6
transporter substrate-binding domain-containing proteinCFF01_RS08880Not AvailablePositive2042052 - 2044847104606.0
aspartate--trna ligaseCFF01_RS08885Not AvailablePositive2045017 - 204679565869.0
yebc/pmpr family dna-binding transcriptional regulatorCFF01_RS08890Not AvailablePositive2046867 - 204761326591.9
crossover junction endodeoxyribonuclease ruvcCFF01_RS08895Not AvailablePositive2047621 - 204814218542.4

Displaying genes 1761 – 1770 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.