Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic metabolism and the presence of flagella, which facilitate motility in its environment. This strain thrives optimally at a temperature of 32°C and is classified as mesophilic, indicating it can grow within a moderate temperature range, although specific limits are not provided. Notably, Shewanella marisflavi strain EP1 is non-spore-forming, suggesting that it relies on other survival mechanisms rather than sporulation for resilience in unfavorable conditions. The genomic structure of this strain includes a single replicon, which may influence its genetic stability and replication processes. Ecologically, Shewanella species, including S. marisflavi, are often associated with aquatic environments, where they play significant roles in biogeochemical cycles, particularly in the reduction of metals and organic compounds. The anaerobic nature of strain EP1 indicates that it may participate in anaerobic respiration processes, contributing to nutrient cycling in marine ecosystems. The presence of flagella suggests that it can navigate through sediment or water columns, potentially impacting the distribution of nutrients and organic matter in its habitat. These traits highlight the ecological importance of S. marisflavi strain EP1 in its environment, emphasizing its role in anaerobic processes within aquatic ecosystems. The strain is cataloged under accession NZ_CP022272.1, facilitating further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella marisflavi strain EP1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase u32 family proteinCFF01_RS05465Not AvailableNegative1222601 - 122360236680.8
scp2 domain-containing proteinCFF01_RS05470Not AvailablePositive1223799 - 122431119371.7
yfhl family 4fe-4s dicluster ferredoxinCFF01_RS05475Not AvailableNegative1224459 - 12247169429.19
trna 5-hydroxyuridine modification protein yegqCFF01_RS05480Not AvailableNegative1224983 - 122634150885.7
hdod domain-containing proteinCFF01_RS05485Not AvailablePositive1226632 - 122747431202.8
putative bifunctional diguanylate cyclase/phosphodiesteraseCFF01_RS05490Not AvailablePositive1227544 - 122905256991.9
thioesterase family proteinCFF01_RS05495Not AvailableNegative1229081 - 122952417173.5
substrate-binding periplasmic proteinCFF01_RS05500Not AvailableNegative1229590 - 123038429374.1
eal domain-containing proteinCFF01_RS05505Not AvailablePositive1230696 - 1233728115197.0
dead/deah box helicaseCFF01_RS05510Not AvailablePositive1233815 - 123512547332.2

Displaying genes 1091 – 1100 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.