Shewanella marisflavi strain EP1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella marisflavi strain EP1 is a Gram-negative, non-spore-forming rod that exhibits anaerobic growth, with an optimal temperature for growth at 32.0°C. This microbe is part of the Shewanella genus, which is known for its diverse metabolic capabilities, particularly in anaerobic environments. As a member of the Shewanella genus, S. marisflavi strain EP1 is likely to possess the ability to reduce various electron acceptors, which could include metals and other compounds, facilitating biogeochemical cycling in its habitat. The anaerobic growth requirement indicates that this strain may thrive in environments with limited oxygen availability, potentially contributing to organic matter degradation in sediments or other anoxic ecosystems. The optimal growth temperature of 32.0°C suggests that S. marisflavi strain EP1 is well-suited for marine or brackish environments, where temperatures often fall within this range. This temperature preference aligns with the ecological niche of other Shewanella species, which are commonly found in aquatic environments. Understanding the traits of S. marisflavi strain EP1 enhances our knowledge of microbial diversity and metabolic processes in anaerobic environments. The unique ability of this strain to thrive under these specific conditions may play a crucial role in nutrient cycling and the degradation of organic matter in marine ecosystems, emphasizing the ecological importance of anaerobic microorganisms in maintaining the health and function of these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella marisflavi
Strainstrain EP1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella marisflavi strain EP1


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaCFF01_RS00005Not Available+112 - 149451961.0
dna polymerase iii subunit betaCFF01_RS00010Not Available+1514 - 261440993.3
dna replication/repair protein recfCFF01_RS00015Not Available+2690 - 377240842.1
dna topoisomerase (atp-hydrolyzing) subunit bCFF01_RS00020Not Available+3789 - 620690022.9
hypothetical proteinCFF01_RS00025Not Available+6335 - 706327095.4
5-oxoprolinase subunit pxpaCFF01_RS00030Not Available-7079 - 780725941.4
biotin-dependent carboxyltransferase family proteinCFF01_RS00035Not Available-7797 - 872933419.0
5-oxoprolinase subunit pxpbCFF01_RS00040Not Available-8726 - 938524155.4
glycine--trna ligase subunit betaCFF01_RS00045Not Available-9513 - 1158275371.3
glycine--trna ligase subunit alphaCFF01_RS00050Not Available-11595 - 1250034359.9

Displaying genes 1 – 10 of 3801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites