Xanthomonas citri pv. vignicola strain CFBP7111

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. vignicola strain CFBP7111 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates its motility. This strain contains four replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various environments. The accession numbers associated with strain CFBP7111 are NZ_CP022263.1, NZ_CP022266.1, NZ_CP022265.1, and NZ_CP022264.1, each representing different segments of its genomic information. These replicons can provide insights into the genetic diversity and potential virulence factors of this strain, which is significant for understanding its role in plant pathology. As an ecologically relevant organism, Xanthomonas citri pv. vignicola is known to affect various host plants. Its flagella enable efficient movement towards host tissues, which may enhance its ability to infect and colonize. The combination of its Gram-negative cell wall structure and motility features suggests that this bacterium is well-equipped for survival in competitive environments, particularly within agricultural systems where it may interact with other microbial communities. Understanding the biology and ecology of Xanthomonas citri pv. vignicola strain CFBP7111 is crucial for developing effective management strategies against the diseases it may cause in crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. vignicola strain CFBP7111

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. vignicola strain CFBP7111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plA,

Gene Summary

Adenine Count

28007 bp

Thymine Count

27990 bp

Guanine Count

46291 bp

Cytosine Count

45789 bp

Genome Length

148077 bp

Protein-coding Genes

146 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system export apparatus subunit sctuXcvCFBP7111P_RS22715Not AvailablePositive5052913 - 505399239058.9
fhipep family type iii secretion proteinXcvCFBP7111P_RS22720Not AvailablePositive5053986 - 505592369913.1
type iii secretion system protein sctpXcvCFBP7111P_RS22725Not AvailablePositive5055923 - 505656123531.9
type iii secretion system cytoplasmic ring protein sctqXcvCFBP7111P_RS22730Not AvailablePositive5056654 - 505760733393.6
type iii secretion system export apparatus subunit sctrXcvCFBP7111P_RS22735Not AvailablePositive5057594 - 505823823477.7
type iii secretion system export apparatus subunit sctsXcvCFBP7111P_RS22740Not AvailablePositive5058243 - 50585038958.28
4-hydroxyphenylacetate catabolism regulator hpaaXcvCFBP7111P_RS22745Not AvailablePositive5058500 - 505930929441.0
hrpd5 family proteinXcvCFBP7111P_RS22750Not AvailablePositive5059306 - 506024433338.5
hrpd6 family proteinXcvCFBP7111P_RS22755Not AvailablePositive5060254 - 50604968718.23
hrpe family proteinXcvCFBP7111P_RS26435Not AvailablePositive5060575 - 50608569867.72

Displaying genes 4661 – 4670 of 5003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.