Xanthomonas citri pv. vignicola strain CFBP7111

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. vignicola strain CFBP7111 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates its motility. This strain contains four replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various environments. The accession numbers associated with strain CFBP7111 are NZ_CP022263.1, NZ_CP022266.1, NZ_CP022265.1, and NZ_CP022264.1, each representing different segments of its genomic information. These replicons can provide insights into the genetic diversity and potential virulence factors of this strain, which is significant for understanding its role in plant pathology. As an ecologically relevant organism, Xanthomonas citri pv. vignicola is known to affect various host plants. Its flagella enable efficient movement towards host tissues, which may enhance its ability to infect and colonize. The combination of its Gram-negative cell wall structure and motility features suggests that this bacterium is well-equipped for survival in competitive environments, particularly within agricultural systems where it may interact with other microbial communities. Understanding the biology and ecology of Xanthomonas citri pv. vignicola strain CFBP7111 is crucial for developing effective management strategies against the diseases it may cause in crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. vignicola strain CFBP7111

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. vignicola strain CFBP7111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plA,

Gene Summary

Adenine Count

28007 bp

Thymine Count

27990 bp

Guanine Count

46291 bp

Cytosine Count

45789 bp

Genome Length

148077 bp

Protein-coding Genes

146 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseXcvCFBP7111P_RS20710Not AvailableNegative4597772 - 459885739629.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseXcvCFBP7111P_RS20715Not AvailableNegative4598847 - 460035851525.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseXcvCFBP7111P_RS20720Not AvailableNegative4600355 - 460183951313.7
peptidoglycan d,d-transpeptidase ftsi family proteinXcvCFBP7111P_RS20725Not AvailableNegative4601848 - 460371666961.5
cell division protein ftslXcvCFBP7111P_RS20735Not AvailableNegative4603928 - 460419110017.4
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhXcvCFBP7111P_RS20740Not AvailableNegative4604188 - 460523136957.0
division/cell wall cluster transcriptional repressor mrazXcvCFBP7111P_RS20745Not AvailableNegative4605246 - 460570116879.2
nrde family proteinXcvCFBP7111P_RS20750Not AvailablePositive4606017 - 460678427129.2
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive4607182 - 4607608Not Available
16s rrna (cytidine(1402)-2'-o)-methyltransferaseXcvCFBP7111P_RS20765Not AvailableNegative4607755 - 460857628941.7

Displaying genes 4281 – 4290 of 5003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.