Xanthomonas citri pv. vignicola strain CFBP7111

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. vignicola strain CFBP7111 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates its motility. This strain contains four replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various environments. The accession numbers associated with strain CFBP7111 are NZ_CP022263.1, NZ_CP022266.1, NZ_CP022265.1, and NZ_CP022264.1, each representing different segments of its genomic information. These replicons can provide insights into the genetic diversity and potential virulence factors of this strain, which is significant for understanding its role in plant pathology. As an ecologically relevant organism, Xanthomonas citri pv. vignicola is known to affect various host plants. Its flagella enable efficient movement towards host tissues, which may enhance its ability to infect and colonize. The combination of its Gram-negative cell wall structure and motility features suggests that this bacterium is well-equipped for survival in competitive environments, particularly within agricultural systems where it may interact with other microbial communities. Understanding the biology and ecology of Xanthomonas citri pv. vignicola strain CFBP7111 is crucial for developing effective management strategies against the diseases it may cause in crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. vignicola strain CFBP7111

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. vignicola strain CFBP7111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plA,

Gene Summary

Adenine Count

28007 bp

Thymine Count

27990 bp

Guanine Count

46291 bp

Cytosine Count

45789 bp

Genome Length

148077 bp

Protein-coding Genes

146 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf937 domain-containing proteinXcvCFBP7111P_RS17760Not AvailablePositive3992522 - 399313620258.3
catalase/peroxidase hpiXcvCFBP7111P_RS17765Not AvailablePositive3993599 - 399584582054.9
rna-binding s4 domain-containing proteinXcvCFBP7111P_RS17770Not AvailableNegative3995969 - 399637615100.0
glutathione s-transferase family proteinXcvCFBP7111P_RS17775Not AvailableNegative3996601 - 399725723525.1
helix-turn-helix transcriptional regulatorXcvCFBP7111P_RS17780Not AvailableNegative3997316 - 399801125317.8
mate family efflux transporterXcvCFBP7111P_RS17790Not AvailablePositive3998393 - 399987752249.3
50s ribosomal protein l19XcvCFBP7111P_RS17795Not AvailableNegative4000134 - 400054114754.8
trna (guanosine(37)-n1)-methyltransferase trmdXcvCFBP7111P_RS17800Not AvailableNegative4000686 - 400144427814.2
ribosome maturation factor rimmXcvCFBP7111P_RS17805Not AvailableNegative4001508 - 400202019196.9
30s ribosomal protein s16XcvCFBP7111P_RS17810Not AvailableNegative4002064 - 40023219546.51

Displaying genes 3751 – 3760 of 5003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.