Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | CE139_RS04330 | Not Available | Positive | 938324 - 939796 | 54560.9 |
| translation initiation factor if-2 | CE139_RS04335 | Not Available | Positive | 939823 - 942378 | 91953.8 |
| 30s ribosome-binding factor rbfa | CE139_RS04340 | Not Available | Positive | 942511 - 942894 | 14344.3 |
| trna pseudouridine(55) synthase trub | CE139_RS04345 | Not Available | Positive | 942896 - 943810 | 33007.6 |
| 30s ribosomal protein s15 | CE139_RS04350 | Not Available | Positive | 943903 - 944172 | 10131.3 |
| polyribonucleotide nucleotidyltransferase | CE139_RS04355 | Not Available | Positive | 944348 - 946450 | 75431.4 |
| lysr substrate-binding domain-containing protein | CE139_RS04360 | Not Available | Negative | 946666 - 947550 | 33364.1 |
| aldehyde dehydrogenase family protein | CE139_RS04365 | Not Available | Positive | 947664 - 949154 | 53140.3 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS04370 | Not Available | Positive | 949179 - 950456 | 46379.5 |
| branched-chain amino acid abc transporter substrate-binding protein | CE139_RS04375 | Not Available | Positive | 950950 - 952071 | 39530.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





