Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS04280 | Not Available | Positive | 930793 - 931245 | 15951.0 |
| yhby family rna-binding protein | CE139_RS04285 | Not Available | Negative | 931233 - 931544 | 11601.1 |
| atp-dependent zinc metalloprotease ftsh | CE139_RS04290 | Not Available | Positive | 932092 - 934008 | 69681.8 |
| dihydropteroate synthase | CE139_RS04295 | Not Available | Positive | 934016 - 934879 | 30240.8 |
| phosphoglucosamine mutase | CE139_RS04300 | Not Available | Positive | 934879 - 936216 | 47573.5 |
| triose-phosphate isomerase | CE139_RS04305 | Not Available | Positive | 936283 - 937041 | 25682.8 |
| preprotein translocase subunit secg | CE139_RS04310 | Not Available | Positive | 937041 - 937421 | 12873.5 |
| Trna-leu | Not Available | Not Available | Positive | 937438 - 937523 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 937612 - 937688 | Not Available |
| ribosome maturation factor rimp | CE139_RS04325 | Not Available | Positive | 937816 - 938274 | 17151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





