Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron uptake transcriptional regulator | CE139_RS04230 | Not Available | Positive | 918115 - 918519 | 15284.2 |
| dna repair protein recn | CE139_RS04235 | Not Available | Negative | 918583 - 920250 | 61417.9 |
| nucleotide exchange factor grpe | CE139_RS04240 | Not Available | Positive | 920416 - 920979 | 20703.5 |
| molecular chaperone dnak | CE139_RS04245 | Not Available | Positive | 921073 - 923001 | 68768.5 |
| molecular chaperone dnaj | CE139_RS04250 | Not Available | Positive | 923114 - 924247 | 40256.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CE139_RS04255 | Not Available | Positive | 924302 - 925108 | 28649.6 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | CE139_RS04260 | Not Available | Positive | 925285 - 926421 | 40773.6 |
| leucine efflux protein leue | CE139_RS04265 | Not Available | Positive | 926443 - 927099 | 23617.3 |
| carbamoyl-phosphate synthase large subunit | CE139_RS04270 | Not Available | Positive | 927121 - 930342 | 117544.0 |
| transcription elongation factor grea | CE139_RS04275 | Not Available | Positive | 930339 - 930815 | 17317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





