Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | CE139_RS04130 | Not Available | Positive | 896546 - 897856 | 45759.2 |
| cyclic nucleotide-binding domain-containing protein | CE139_RS04135 | Not Available | Negative | 898034 - 898846 | 29836.2 |
| aaa family atpase | CE139_RS04140 | Not Available | Negative | 898977 - 900524 | 56725.6 |
| penicillin-binding protein 1b | CE139_RS04145 | Not Available | Positive | 900678 - 903020 | 85266.0 |
| tetratricopeptide repeat protein | CE139_RS04150 | Not Available | Positive | 903056 - 903805 | 24848.1 |
| yqcc family protein | CE139_RS04155 | Not Available | Positive | 903805 - 904131 | 12206.8 |
| duf4124 domain-containing protein | CE139_RS04160 | Not Available | Negative | 904133 - 904597 | 17225.1 |
| acetolactate synthase 3 large subunit | CE139_RS04165 | Not Available | Positive | 904996 - 906720 | 63039.5 |
| acetolactate synthase small subunit | CE139_RS04170 | Not Available | Positive | 906723 - 907214 | 17701.4 |
| ketol-acid reductoisomerase | CE139_RS04175 | Not Available | Positive | 907241 - 908257 | 36287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





