Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | CE139_RS00040 | Not Available | Positive | 4059 - 4835 | 28705.3 |
| atp-dependent zinc protease | CE139_RS00045 | Not Available | Positive | 4851 - 5327 | 17251.1 |
| 30s ribosomal protein s6--l-glutamate ligase | CE139_RS00050 | Not Available | Positive | 5324 - 6229 | 32499.8 |
| atp-binding protein | CE139_RS00055 | Not Available | Negative | 6379 - 7698 | 49002.2 |
| undecaprenyl-diphosphate phosphatase | CE139_RS00060 | Not Available | Positive | 7836 - 8708 | 31107.9 |
| two-component system response regulator ompr | CE139_RS00065 | Not Available | Negative | 8748 - 9482 | 27245.0 |
| tex family protein | CE139_RS00070 | Not Available | Positive | 9658 - 11976 | 83411.9 |
| paai family thioesterase | CE139_RS00075 | Not Available | Positive | 11979 - 12362 | 13411.2 |
| glutamate--cysteine ligase | CE139_RS00080 | Not Available | Positive | 12573 - 14150 | 58804.6 |
| amino-acid n-acetyltransferase | CE139_RS00085 | Not Available | Negative | 14804 - 16102 | 47248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





