Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component i | CE139_RS03980 | Not Available | Positive | 861592 - 863070 | 53991.9 |
| anthranilate synthase component ii | CE139_RS03985 | Not Available | Positive | 863081 - 863674 | 21710.1 |
| anthranilate phosphoribosyltransferase | CE139_RS03990 | Not Available | Positive | 863675 - 864724 | 36753.4 |
| indole-3-glycerol phosphate synthase trpc | CE139_RS03995 | Not Available | Positive | 864721 - 865548 | 29880.2 |
| bcct family transporter | CE139_RS04000 | Not Available | Positive | 865820 - 867601 | 63944.2 |
| camp-activated global transcriptional regulator crp | CE139_RS04005 | Not Available | Negative | 867660 - 868304 | 24081.3 |
| osmc family protein | CE139_RS04010 | Not Available | Positive | 868513 - 868935 | 15163.5 |
| adenosylmethionine decarboxylase | CE139_RS04015 | Not Available | Positive | 869200 - 869994 | 30506.8 |
| cation:proton antiporter | CE139_RS04020 | Not Available | Negative | 870052 - 871311 | 45210.6 |
| hypothetical protein | CE139_RS04025 | Not Available | Negative | 871512 - 871703 | 6874.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





