Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsy | CE139_RS03880 | Not Available | Negative | 840093 - 840662 | 20379.8 |
| dihydroneopterin aldolase | CE139_RS03885 | Not Available | Positive | 840773 - 841126 | 13185.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CE139_RS03890 | Not Available | Positive | 841123 - 841656 | 19556.6 |
| multifunctional cca addition/repair protein | CE139_RS03895 | Not Available | Negative | 842021 - 843148 | 41034.4 |
| spovr family protein | CE139_RS03900 | Not Available | Negative | 843201 - 844742 | 60422.4 |
| yeah/yhbh family protein | CE139_RS03905 | Not Available | Negative | 844739 - 846010 | 48536.7 |
| prka family serine protein kinase | CE139_RS03910 | Not Available | Negative | 846087 - 848009 | 73649.3 |
| thiosulfate sulfurtransferase glpe | CE139_RS03915 | Not Available | Negative | 848370 - 848699 | 11987.8 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | CE139_RS03920 | Not Available | Negative | 848696 - 849517 | 30677.9 |
| co2+/mg2+ efflux protein apag | CE139_RS03925 | Not Available | Negative | 849689 - 850075 | 14008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





