Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | CE139_RS03780 | Not Available | Positive | 820542 - 821606 | 39609.5 |
| duf4337 domain-containing protein | CE139_RS03785 | Not Available | Positive | 821673 - 822254 | 21029.9 |
| hypothetical protein | CE139_RS03790 | Not Available | Positive | 822818 - 824014 | 45728.4 |
| hypothetical protein | CE139_RS03795 | Not Available | Positive | 824011 - 825093 | 40573.0 |
| hypothetical protein | CE139_RS03800 | Not Available | Positive | 825080 - 825751 | 24902.3 |
| hypothetical protein | CE139_RS03805 | Not Available | Negative | 825797 - 826864 | 40307.8 |
| plasmid mobilization relaxosome protein mobc | CE139_RS25215 | Not Available | Negative | 826958 - 827227 | 10445.5 |
| p-type dna transfer protein virb5 | CE139_RS03815 | Not Available | Positive | 827907 - 828671 | 28532.0 |
| hypothetical protein | CE139_RS03820 | Not Available | Positive | 828673 - 829164 | 18055.2 |
| eexn family lipoprotein | CE139_RS03825 | Not Available | Positive | 829161 - 829415 | 9671.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





