Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter rard | CE139_RS03680 | Not Available | Negative | 797191 - 798111 | 34096.7 |
| serine/threonine protein kinase | CE139_RS03685 | Not Available | Negative | 798397 - 799371 | 37210.1 |
| phox family protein | CE139_RS03690 | Not Available | Negative | 799482 - 801371 | 68771.1 |
| comf family protein | CE139_RS03695 | Not Available | Negative | 801438 - 802175 | 26807.8 |
| hypothetical protein | CE139_RS03700 | Not Available | Negative | 802234 - 802530 | 10661.5 |
| alpha/beta fold hydrolase | CE139_RS03705 | Not Available | Positive | 802643 - 803344 | 25145.8 |
| cupin domain-containing protein | CE139_RS03710 | Not Available | Positive | 803413 - 804000 | 20561.2 |
| duf1810 domain-containing protein | CE139_RS03715 | Not Available | Negative | 803997 - 804419 | 15626.5 |
| mfs transporter | CE139_RS03720 | Not Available | Negative | 804491 - 805825 | 46630.2 |
| thioredoxin family protein | CE139_RS03725 | Not Available | Positive | 805990 - 806313 | 11731.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





