Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | CE139_RS03630 | Not Available | Positive | 788998 - 789756 | 28380.3 |
| substrate-binding periplasmic protein | CE139_RS03635 | Not Available | Positive | 789806 - 790567 | 28235.1 |
| substrate-binding periplasmic protein | CE139_RS03640 | Not Available | Positive | 790782 - 791543 | 28746.5 |
| divergent polysaccharide deacetylase family protein | CE139_RS03645 | Not Available | Negative | 791560 - 792321 | 26906.6 |
| s41 family peptidase | CE139_RS03650 | Not Available | Negative | 792318 - 793667 | 47102.5 |
| murein hydrolase activator envc family protein | CE139_RS03655 | Not Available | Negative | 793697 - 794980 | 47529.3 |
| nad(p)-dependent oxidoreductase | CE139_RS03660 | Not Available | Negative | 795114 - 795725 | 21523.5 |
| rhodanese-like domain-containing protein | CE139_RS03665 | Not Available | Positive | 795908 - 796327 | 14786.0 |
| glutaredoxin 3 | CE139_RS03670 | Not Available | Positive | 796369 - 796623 | 9333.14 |
| protein-export chaperone secb | CE139_RS03675 | Not Available | Positive | 796651 - 797115 | 17052.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





