Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | CE139_RS03580 | Not Available | Negative | 779946 - 780218 | 10597.6 |
| a/g-specific adenine glycosylase | CE139_RS03585 | Not Available | Negative | 780215 - 781279 | 39224.4 |
| asma family protein | CE139_RS03590 | Not Available | Negative | 781276 - 783495 | 79651.9 |
| ofa family mfs transporter | CE139_RS03595 | Not Available | Positive | 783791 - 785455 | 59440.7 |
| imidazoleglycerol-phosphate dehydratase hisb | CE139_RS03600 | Not Available | Positive | 785600 - 786193 | 21911.3 |
| imidazole glycerol phosphate synthase subunit hish | CE139_RS03605 | Not Available | Positive | 786193 - 786831 | 23381.9 |
| duf2164 domain-containing protein | CE139_RS03610 | Not Available | Positive | 786831 - 787088 | 9847.81 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CE139_RS03615 | Not Available | Positive | 787120 - 787857 | 25967.2 |
| chorismate mutase | CE139_RS03620 | Not Available | Positive | 787868 - 788164 | 10650.8 |
| imidazole glycerol phosphate synthase subunit hisf | CE139_RS03625 | Not Available | Positive | 788186 - 788968 | 27525.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





