Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | CE139_RS03530 | Not Available | Negative | 773028 - 774518 | 52510.7 |
| accessory factor ubik family protein | CE139_RS03535 | Not Available | Negative | 774582 - 774881 | 10784.8 |
| p-ii family nitrogen regulator | CE139_RS03540 | Not Available | Positive | 775276 - 775614 | 12286.9 |
| ammonium transporter | CE139_RS03545 | Not Available | Positive | 775663 - 777003 | 46291.1 |
| secondary thiamine-phosphate synthase enzyme yjbq | CE139_RS03550 | Not Available | Positive | 777176 - 777595 | 15566.5 |
| transcriptional regulator suta | CE139_RS03555 | Not Available | Positive | 777667 - 777999 | 12053.4 |
| hypothetical protein | CE139_RS03560 | Not Available | Negative | 778263 - 778598 | 12966.2 |
| hypothetical protein | CE139_RS03565 | Not Available | Negative | 778809 - 779216 | 14645.9 |
| cupin domain-containing protein | CE139_RS03570 | Not Available | Positive | 779329 - 779667 | 12254.5 |
| Trna-phe | Not Available | Not Available | Positive | 779784 - 779859 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





