Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanyl-trna editing protein | CE139_RS03330 | Not Available | Negative | 732216 - 732854 | 23147.4 |
| lysr family transcriptional regulator | CE139_RS03335 | Not Available | Positive | 732947 - 733930 | 35860.5 |
| sugar porter family mfs transporter | CE139_RS03340 | Not Available | Positive | 734130 - 735530 | 49873.1 |
| upf0158 family protein | CE139_RS03345 | Not Available | Positive | 735609 - 736097 | 18759.4 |
| glycine cleavage system protein r | CE139_RS03350 | Not Available | Negative | 736191 - 736721 | 18873.9 |
| haloacid dehalogenase-like hydrolase | CE139_RS03355 | Not Available | Negative | 736781 - 737839 | 38992.8 |
| mfs transporter | CE139_RS03360 | Not Available | Negative | 737976 - 739256 | 46062.1 |
| opt/ysl family transporter | CE139_RS03365 | Not Available | Negative | 739477 - 741210 | 59890.9 |
| lysr family transcriptional regulator | CE139_RS03370 | Not Available | Negative | 741244 - 742194 | 34731.9 |
| aldo/keto reductase | CE139_RS03375 | Not Available | Positive | 742482 - 743462 | 36225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





