Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS03285 | Not Available | Positive | 720492 - 721469 | 37289.7 |
| cellulase family glycosylhydrolase | CE139_RS03290 | Not Available | Positive | 721754 - 724357 | 93901.9 |
| dna helicase rep | CE139_RS03295 | Not Available | Negative | 724778 - 726790 | 76742.1 |
| hypothetical protein | CE139_RS03300 | Not Available | Negative | 726850 - 727542 | 24965.7 |
| flavin reductase family protein | CE139_RS03305 | Not Available | Positive | 727716 - 728300 | 20885.1 |
| methyl-accepting chemotaxis protein | CE139_RS25615 | Not Available | Negative | 728346 - 728891 | 19126.5 |
| duf2857 domain-containing protein | CE139_RS25620 | Not Available | Negative | 729045 - 730307 | 45354.7 |
| arc family dna-binding protein | CE139_RS03315 | Not Available | Negative | 730408 - 730737 | 12457.0 |
| lyse family translocator | CE139_RS03320 | Not Available | Negative | 730767 - 731408 | 23045.6 |
| 2og-fe(ii) oxygenase | CE139_RS03325 | Not Available | Negative | 731410 - 732180 | 28750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





