Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | CE139_RS03190 | Not Available | Negative | 701998 - 702402 | 15484.0 |
| xanthine phosphoribosyltransferase | CE139_RS03195 | Not Available | Negative | 702406 - 702978 | 20336.6 |
| methyl-accepting chemotaxis protein | CE139_RS25605 | Not Available | Positive | 704572 - 705216 | 21907.5 |
| hypothetical protein | CE139_RS03205 | Not Available | Negative | 705269 - 705535 | 9204.72 |
| hypothetical protein | CE139_RS03210 | Not Available | Negative | 705625 - 706731 | 39369.2 |
| dethiobiotin synthase | CE139_RS03215 | Not Available | Negative | 706808 - 707479 | 22737.8 |
| malonyl-acp o-methyltransferase bioc | CE139_RS03220 | Not Available | Negative | 707485 - 708282 | 28755.6 |
| alpha/beta fold hydrolase | CE139_RS03225 | Not Available | Negative | 708263 - 708988 | 26368.6 |
| 8-amino-7-oxononanoate synthase | CE139_RS03230 | Not Available | Negative | 708996 - 710171 | 41241.8 |
| biotin synthase biob | CE139_RS03235 | Not Available | Negative | 710325 - 711374 | 38573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





