Pseudomonas oryzihabitans strain MS8

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas oryzihabitans strain MS8 is a Gram-negative, rod-shaped bacterium that thrives in damp and humid environments, including farm settings, fresh water, soil, and on surfaces of respiratory devices and mechanical ventilators. This species exhibits aerobic characteristics and is motile due to the presence of flagella, which allows it to navigate through its diverse habitats. This strain has been documented to inhabit various hosts, including Homo sapiens (humans), Oryza sativa (rice), Capsicum annuum (bell pepper), Cucumis melo (melon), and Capsicum chinense (habanero pepper). Within humans, Pseudomonas oryzihabitans strain MS8 is associated with a range of health effects, including bacteremia, pneumonia, peritonitis, meningitis, and septicemia, among others. Its pathogenicity in plants, particularly rice, indicates a potential role in agricultural contexts. The presence of this bacterium in both clinical settings and agricultural environments underscores its ecological versatility and its dual impact on human health and plant life. As it can exist in mechanical ventilators and respiratory equipment, the strain poses risks for patients with compromised health, especially those reliant on such devices. Understanding the habitats and effects of Pseudomonas oryzihabitans strain MS8 can inform infection control practices and agricultural management strategies to mitigate its pathogenic potential in both humans and plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas oryzihabitans
Strainstrain MS8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas oryzihabitans strain MS8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdamp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Capsicum annuum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman; Plant

Genome Summary

Pseudomonas oryzihabitans strain MS8 chromosome.

Gene Summary

Adenine Count

937969 bp

Thymine Count

937205 bp

Guanine Count

1780010 bp

Cytosine Count

1778132 bp

Genome Length

5436061 bp

Protein-coding Genes

4960 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aliphatic sulfonate abc transporter substrate-binding proteinCE139_RS03140Not AvailablePositive692195 - 69314833352.2
zinc abc transporter permease subunit znubCE139_RS03145Not AvailableNegative693288 - 69407327467.0
zinc abc transporter atp-binding protein znucCE139_RS03150Not AvailableNegative694066 - 69483627673.7
fur family transcriptional regulatorCE139_RS03155Not AvailableNegative694833 - 69531817445.9
zinc abc transporter substrate-binding protein znuaCE139_RS03160Not AvailablePositive695384 - 69636434822.5
response regulator transcription factorCE139_RS03165Not AvailablePositive696883 - 69756025631.9
atp-binding proteinCE139_RS03170Not AvailablePositive697557 - 69895152295.5
thioesterase domain-containing proteinCE139_RS03175Not AvailablePositive699013 - 69946517173.5
peptidoglycan d,d-transpeptidase ftsi family proteinCE139_RS03180Not AvailableNegative699717 - 70142061149.1
ykgj family cysteine cluster proteinCE139_RS03185Not AvailablePositive701550 - 70186412066.3

Displaying genes 711 – 720 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticaemiaCausesPMC10277831
Prosthetic valve endocarditisCausesPMC10277831
PeritonitisCausesPMC10277831
Periorbital cellulitisCausesPMC10865052
SepsisCausesPMC5423562
BacteremiaCausesPMC5423562
PeritonitisCausesPMC5423562
EndophthalmitisCausesPMC5423562
Biliary tract infectionsCausesPMC5423562
MeningitisCausesPMC5423562

Displaying health effects 1 – 10 of 15 in total