Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | CE139_RS03040 | Not Available | Negative | 667461 - 668306 | 30606.3 |
| hydrogen peroxide-inducible genes activator | CE139_RS03045 | Not Available | Positive | 668458 - 669390 | 34545.0 |
| atp-dependent dna helicase recg | CE139_RS03050 | Not Available | Positive | 669387 - 671462 | 76483.7 |
| aminoacyl-trna deacylase and hdod domain-containing protein | CE139_RS03055 | Not Available | Positive | 671538 - 672932 | 51387.4 |
| 50s ribosomal protein l33 | CE139_RS03060 | Not Available | Negative | 673027 - 673182 | 6047.53 |
| 50s ribosomal protein l28 | CE139_RS03065 | Not Available | Negative | 673194 - 673430 | 9119.14 |
| abc transporter substrate-binding protein | CE139_RS03070 | Not Available | Positive | 673822 - 675399 | 57746.6 |
| na+/h+ antiporter subunit g | CE139_RS03075 | Not Available | Negative | 675451 - 675780 | 11969.1 |
| k+/h+ antiporter subunit f | CE139_RS03080 | Not Available | Negative | 675795 - 676064 | 9632.32 |
| na+/h+ antiporter subunit e | CE139_RS03085 | Not Available | Negative | 676049 - 676552 | 18738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





