Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Minor tail protein | CE139_RS13405 | Not Available | Positive | 2869695 - 2870585 | 31998.4 |
| Hypothetical protein | CE139_RS13410 | Not Available | Positive | 2870582 - 2870998 | 15333.7 |
| Putative tail protein | CE139_RS13415 | Not Available | Positive | 2870995 - 2874183 | 113470.0 |
| Virion structural protein | CE139_RS13420 | Not Available | Positive | 2874183 - 2875859 | 55164.3 |
| Hypothetical protein | CE139_RS13425 | Not Available | Positive | 2875885 - 2876472 | 20665.9 |
| Hypothetical protein | CE139_RS13430 | Not Available | Positive | 2876469 - 2876957 | 16539.4 |
| Hypothetical protein | CE139_RS13435 | Not Available | Positive | 2876967 - 2877485 | 17814.7 |
| Tail fiber | CE139_RS13440 | Not Available | Positive | 2877638 - 2878414 | 26384.4 |
| Hypothetical protein | CE139_RS13445 | Not Available | Positive | 2878411 - 2878848 | 16101.8 |
| Hypothetical protein | CE139_RS13450 | Not Available | Positive | 2878845 - 2879204 | 13480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





