Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | CE139_RS02990 | Not Available | Positive | 656060 - 657112 | 37957.5 |
| sugar porter family mfs transporter | CE139_RS02995 | Not Available | Positive | 657222 - 658622 | 50795.5 |
| hypothetical protein | CE139_RS03000 | Not Available | Negative | 658667 - 659104 | 13838.4 |
| aldose 1-epimerase family protein | CE139_RS03005 | Not Available | Positive | 659336 - 660544 | 44183.3 |
| acyl-coa thioesterase | CE139_RS03010 | Not Available | Negative | 660563 - 660964 | 14431.3 |
| mfs transporter | CE139_RS03015 | Not Available | Positive | 661446 - 662759 | 46809.9 |
| formaldehyde dehydrogenase, glutathione-independent | CE139_RS03020 | Not Available | Positive | 662983 - 664182 | 41801.4 |
| hypothetical protein | CE139_RS03025 | Not Available | Positive | 664327 - 664689 | 13758.7 |
| aldo/keto reductase | CE139_RS03030 | Not Available | Positive | 664757 - 665587 | 30675.6 |
| glutamate/aspartate:proton symporter gltp | CE139_RS03035 | Not Available | Positive | 665899 - 667248 | 47898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





