Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thermostable hemolysin | CE139_RS02940 | Not Available | Negative | 645654 - 646328 | 24196.1 |
| hypothetical protein | CE139_RS02945 | Not Available | Positive | 646460 - 646681 | 7554.23 |
| atp-binding protein | CE139_RS02950 | Not Available | Negative | 646678 - 648429 | 63726.2 |
| phosphate regulon sensor histidine kinase phor | CE139_RS02955 | Not Available | Negative | 648485 - 649798 | 48459.9 |
| phosphate regulon transcriptional regulator phob | CE139_RS02960 | Not Available | Negative | 649817 - 650506 | 25748.1 |
| iclr family transcriptional regulator | CE139_RS02965 | Not Available | Positive | 650666 - 651460 | 28053.8 |
| 2-dehydro-3-deoxygalactonokinase | CE139_RS02970 | Not Available | Positive | 651457 - 652410 | 33832.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | CE139_RS02975 | Not Available | Positive | 652403 - 653029 | 21126.6 |
| galactonate dehydratase | CE139_RS02980 | Not Available | Positive | 653150 - 654298 | 42698.0 |
| mfs transporter | CE139_RS02985 | Not Available | Positive | 654630 - 655955 | 47665.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





