Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease domain-containing protein | CE139_RS02890 | Not Available | Negative | 635125 - 635457 | 12937.5 |
| hypothetical protein | CE139_RS02895 | Not Available | Negative | 636675 - 636983 | 11389.3 |
| mfs transporter | CE139_RS02900 | Not Available | Negative | 637159 - 638466 | 47447.5 |
| sigma-54-dependent transcriptional regulator | CE139_RS02905 | Not Available | Negative | 638636 - 639961 | 48413.5 |
| sensor histidine kinase | CE139_RS02910 | Not Available | Negative | 640026 - 641399 | 50153.0 |
| response regulator transcription factor | CE139_RS02915 | Not Available | Negative | 641396 - 642055 | 24648.6 |
| tetratricopeptide repeat protein | CE139_RS02920 | Not Available | Negative | 642066 - 642713 | 23259.8 |
| sdr family oxidoreductase | CE139_RS02925 | Not Available | Negative | 642710 - 643519 | 28995.6 |
| tena family transcriptional regulator | CE139_RS02930 | Not Available | Negative | 643506 - 644189 | 24846.7 |
| amp-binding protein | CE139_RS02935 | Not Available | Negative | 644186 - 645664 | 52519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





