Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | CE139_RS02840 | Not Available | Positive | 620692 - 622209 | 53960.4 |
| ubiquinone-dependent pyruvate dehydrogenase | CE139_RS02845 | Not Available | Negative | 622228 - 623952 | 61188.8 |
| hypothetical protein | CE139_RS02850 | Not Available | Positive | 624724 - 625893 | 40406.9 |
| glycine cleavage system protein gcvh | CE139_RS02855 | Not Available | Positive | 626424 - 626792 | 13348.5 |
| aminomethyl-transferring glycine dehydrogenase | CE139_RS02860 | Not Available | Positive | 626800 - 629655 | 102500.0 |
| glycine cleavage system aminomethyltransferase gcvt | CE139_RS02865 | Not Available | Positive | 629837 - 630946 | 39535.8 |
| glutathione s-transferase | CE139_RS02870 | Not Available | Negative | 631051 - 631665 | 22857.8 |
| lysr substrate-binding domain-containing protein | CE139_RS02875 | Not Available | Positive | 631821 - 632726 | 33674.3 |
| hypothetical protein | CE139_RS02880 | Not Available | Negative | 632745 - 632936 | 6991.32 |
| dna topoisomerase iii | CE139_RS02885 | Not Available | Positive | 633180 - 635138 | 71659.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





