Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CE139_RS02740 | Not Available | Positive | 597551 - 599773 | 81736.2 |
| hypothetical protein | CE139_RS02745 | Not Available | Positive | 599785 - 601143 | 50843.1 |
| type i secretion system permease/atpase | CE139_RS02750 | Not Available | Positive | 601169 - 602935 | 62706.1 |
| hlyd family type i secretion periplasmic adaptor subunit | CE139_RS02755 | Not Available | Positive | 602932 - 604251 | 47975.3 |
| tolc family outer membrane protein | CE139_RS02760 | Not Available | Positive | 604331 - 605653 | 48608.6 |
| duf4214 domain-containing protein | CE139_RS02765 | Not Available | Negative | 605766 - 607766 | 71886.8 |
| Trna-thr | Not Available | Not Available | Positive | 607916 - 607991 | Not Available |
| hypothetical protein | CE139_RS02775 | Not Available | Positive | 608108 - 608455 | 12360.0 |
| choline dehydrogenase | CE139_RS02780 | Not Available | Negative | 608597 - 610339 | 64132.8 |
| betaine-aldehyde dehydrogenase | CE139_RS02785 | Not Available | Negative | 610430 - 611902 | 52217.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





