Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | CE139_RS02690 | Not Available | Positive | 582960 - 583991 | 38641.2 |
| nad-dependent epimerase/dehydratase family protein | CE139_RS02695 | Not Available | Positive | 584006 - 584902 | 32636.4 |
| glycosyltransferase family 4 protein | CE139_RS02700 | Not Available | Positive | 584908 - 586044 | 42045.8 |
| glycosyltransferase | CE139_RS02705 | Not Available | Negative | 586053 - 587159 | 41265.2 |
| cell wall-binding repeat 2 family protein | CE139_RS02710 | Not Available | Positive | 587471 - 588367 | 32358.8 |
| duf4214 domain-containing protein | CE139_RS02715 | Not Available | Positive | 588392 - 589504 | 36991.4 |
| glycosyltransferase family 2 protein | CE139_RS02720 | Not Available | Positive | 589610 - 592108 | 90719.1 |
| glycosyltransferase family 2 protein | CE139_RS02725 | Not Available | Positive | 592101 - 594488 | 87727.2 |
| glycosyltransferase | CE139_RS02730 | Not Available | Positive | 594803 - 596299 | 56323.4 |
| hypothetical protein | CE139_RS02735 | Not Available | Positive | 596301 - 597539 | 46381.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





